STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_11244LIM/homeobox protein Lhx4. (223 aa)    
Predicted Functional Partners:
N302_08914
Insulin gene enhancer protein ISL-1.
   
0.974
N302_14161
Homeobox protein aristaless-like 3.
   
0.892
N302_15042
LIM domain-binding protein 2.
    
 0.888
N302_03151
Single-stranded DNA-binding protein 2.
    
 
 0.747
N302_10161
Homeobox protein ANF-1.
    
0.575
N302_00512
Paired mesoderm homeobox protein 1.
   
 0.572
N302_11432
Diencephalon/mesencephalon homeobox protein 1-B.
   
 0.565
N302_12122
Motor neuron and pancreas homeobox protein 1.
   
 
 0.525
N302_14804
LIM/homeobox protein Lhx8.
    
0.510
N302_13041
LIM/homeobox protein Lhx6.
    
0.510
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.