STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_06460Protein phosphatase 1A. (375 aa)    
Predicted Functional Partners:
N302_11817
Dual specificity mitogen-activated protein kinase kinase 3; Belongs to the protein kinase superfamily.
    
  0.933
N302_06265
Dual specificity mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
     
 0.931
N302_15592
Mitogen-activated protein kinase kinase kinase 7.
  
 0.761
N302_06857
Protein phosphatase 1B.
  
  
0.746
N302_09319
Dual specificity mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
    
  0.700
N302_06757
Mitogen-activated protein kinase kinase kinase MLT.
  
  0.661
N302_09210
Non-specific serine/threonine protein kinase.
   
  0.644
N302_07304
Mothers against decapentaplegic homolog.
    
 0.643
N302_07758
Mothers against decapentaplegic homolog.
    
 0.643
N302_10530
Non-specific serine/threonine protein kinase.
   
  0.636
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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