STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_08609COMM domain-containing protein 1. (127 aa)    
Predicted Functional Partners:
N302_02127
COMM domain-containing protein 6.
   
 0.955
N302_13633
COMM domain-containing protein 10.
   
 0.931
N302_15438
COMM domain-containing protein 9.
    
 0.918
N302_10004
COMM domain-containing protein 5.
    
 0.913
N302_03945
COMM domain-containing protein 3.
    
 0.913
N302_08461
COMM domain-containing protein 4.
    
 0.911
N302_00282
COMM domain-containing protein 7.
    
 0.899
N302_04079
COMM domain-containing protein 8.
    
 0.889
N302_13819
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.866
N302_02308
Coiled-coil domain-containing protein 93.
   
 
 0.866
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.