STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_15433Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (347 aa)    
Predicted Functional Partners:
N302_12869
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.975
N302_13022
60S ribosomal protein L35.
  
 
 0.969
N302_00647
60S ribosomal protein L5.
  
 
 0.968
N302_08135
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
   0.964
N302_10424
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.963
N302_16355
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.955
N302_12017
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.954
N302_01252
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.954
N302_09147
60S ribosomal protein L8.
  
 
 0.953
N302_13948
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.941
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.