STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_06433BTB/POZ domain-containing protein 6. (464 aa)    
Predicted Functional Partners:
N302_02514
Cullin-3; Belongs to the cullin family.
    
 0.727
N302_14283
E3 ubiquitin-protein ligase MIB2.
   
 0.661
N302_12745
RING-box protein 1.
    
 0.654
N302_08817
Cullin-associated NEDD8-dissociated protein 1.
     
 0.649
N302_09336
NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.645
N302_15990
Cullin-1; Belongs to the cullin family.
    
 0.638
N302_10251
BTB/POZ domain-containing protein KCTD6.
    
 0.633
N302_10004
COMM domain-containing protein 5.
    
  0.609
N302_15813
NEDD8-activating enzyme E1 catalytic subunit.
    
  0.604
N302_14090
NEDD8-activating enzyme E1 regulatory subunit.
    
  0.604
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.