STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_11138Ferredoxin-fold anticodon-binding domain-containing protein 1. (559 aa)    
Predicted Functional Partners:
N302_06023
Phenylalanine--tRNA ligase beta subunit.
  
 0.978
N302_14313
Leucine-rich repeat-containing protein 47.
  
 0.978
N302_13967
Tyrosine--tRNA ligase.
  
 
 0.922
N302_00755
Adipocyte plasma membrane-associated protein.
  
  
 0.905
N302_14387
S1 motif domain-containing protein.
  
  
 0.905
N302_09235
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.870
N302_03753
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.869
N302_00737
Bifunctional glutamate/proline--tRNA ligase.
  
  
 0.828
N302_04203
Phenylalanine--tRNA ligase alpha subunit.
   
 
 0.757
N302_14555
DNA-directed RNA polymerases I and III subunit RPAC1.
  
  
 0.739
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.