Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N302_01303 | N302_02066 | A0A091ES17 | A0A091FVE0 | General transcription factor IIH subunit 3. | Histone H2A.V; Belongs to the histone H2A family. | 0.614 |
N302_01303 | N302_04218 | A0A091ES17 | A0A091EWD6 | General transcription factor IIH subunit 3. | Histone H2A; Belongs to the histone H2A family. | 0.633 |
N302_01303 | N302_11005 | A0A091ES17 | A0A091EZP4 | General transcription factor IIH subunit 3. | TFIIH basal transcription factor complex helicase XPB subunit. | 0.999 |
N302_01303 | N302_13385 | A0A091ES17 | A0A091EZV2 | General transcription factor IIH subunit 3. | Thymocyte selection-associated high mobility group box protein TOX. | 0.674 |
N302_01303 | N302_13691 | A0A091ES17 | A0A091EYD1 | General transcription factor IIH subunit 3. | General transcription factor IIH subunit 1. | 0.999 |
N302_02066 | N302_01303 | A0A091FVE0 | A0A091ES17 | Histone H2A.V; Belongs to the histone H2A family. | General transcription factor IIH subunit 3. | 0.614 |
N302_02066 | N302_06474 | A0A091FVE0 | A0A091EVH3 | Histone H2A.V; Belongs to the histone H2A family. | AT-rich interactive domain-containing protein 4A. | 0.912 |
N302_02066 | N302_10151 | A0A091FVE0 | A0A091EJ92 | Histone H2A.V; Belongs to the histone H2A family. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.425 |
N302_02066 | N302_10186 | A0A091FVE0 | A0A091EJD0 | Histone H2A.V; Belongs to the histone H2A family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.914 |
N302_02066 | N302_11005 | A0A091FVE0 | A0A091EZP4 | Histone H2A.V; Belongs to the histone H2A family. | TFIIH basal transcription factor complex helicase XPB subunit. | 0.614 |
N302_02066 | N302_13385 | A0A091FVE0 | A0A091EZV2 | Histone H2A.V; Belongs to the histone H2A family. | Thymocyte selection-associated high mobility group box protein TOX. | 0.674 |
N302_02066 | N302_13691 | A0A091FVE0 | A0A091EYD1 | Histone H2A.V; Belongs to the histone H2A family. | General transcription factor IIH subunit 1. | 0.614 |
N302_02066 | N302_14478 | A0A091FVE0 | A0A091EB62 | Histone H2A.V; Belongs to the histone H2A family. | AT-rich interactive domain-containing protein 4B. | 0.912 |
N302_02252 | N302_10151 | A0A091ESV3 | A0A091EJ92 | Actin-related protein 5; Belongs to the actin family. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.995 |
N302_02252 | N302_10186 | A0A091ESV3 | A0A091EJD0 | Actin-related protein 5; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.998 |
N302_02252 | N302_11005 | A0A091ESV3 | A0A091EZP4 | Actin-related protein 5; Belongs to the actin family. | TFIIH basal transcription factor complex helicase XPB subunit. | 0.521 |
N302_02252 | N302_13385 | A0A091ESV3 | A0A091EZV2 | Actin-related protein 5; Belongs to the actin family. | Thymocyte selection-associated high mobility group box protein TOX. | 0.670 |
N302_04218 | N302_01303 | A0A091EWD6 | A0A091ES17 | Histone H2A; Belongs to the histone H2A family. | General transcription factor IIH subunit 3. | 0.633 |
N302_04218 | N302_06474 | A0A091EWD6 | A0A091EVH3 | Histone H2A; Belongs to the histone H2A family. | AT-rich interactive domain-containing protein 4A. | 0.912 |
N302_04218 | N302_10151 | A0A091EWD6 | A0A091EJ92 | Histone H2A; Belongs to the histone H2A family. | Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. | 0.428 |
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