STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_06226Signal recognition particle 19 kDa protein. (124 aa)    
Predicted Functional Partners:
N302_00813
Signal recognition particle 9 kDa protein.
   
 0.999
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.999
N302_03290
Signal recognition particle subunit SRP68.
    
 0.999
N302_04287
Signal recognition particle subunit SRP72.
    
 0.999
N302_01694
Signal recognition particle 14 kDa protein.
   
 0.998
N302_10860
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.990
N302_11059
Signal recognition particle receptor subunit alpha.
   
 
 0.967
N302_16355
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.948
N302_08139
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.943
N302_04983
60S ribosomal protein L4.
    
 0.936
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.