STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_13239RNA-binding protein with multiple splicing. (188 aa)    
Predicted Functional Partners:
N302_14543
Protein quaking.
    
 
 0.849
N302_12664
RNA binding protein fox-1 2.
   
 
 0.753
N302_03839
RNA-binding protein with multiple splicing.
  
  
0.668
N302_08301
Epithelial splicing regulatory protein 1.
    
 
 0.634
N302_11678
RNA binding protein fox-1 1.
   
 
 0.621
N302_07050
Epithelial splicing regulatory protein 2.
    
 
 0.531
N302_13988
KH domain-containing, RNA-binding, signal transduction-associated protein 1.
    
 
 0.522
N302_02558
KH domain-containing, RNA-binding, signal transduction-associated protein 2.
    
 
 0.522
N302_04562
KH domain-containing, RNA-binding, signal transduction-associated protein 3.
    
 
 0.522
N302_00397
RNA-binding protein 38.
    
 
 0.483
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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