STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_02739BEN domain-containing protein 3. (819 aa)    
Predicted Functional Partners:
N302_09504
DNA excision repair protein ERCC-6-like.
    
   0.791
N302_10561
Putative DNA repair and recombination protein RAD26-like.
    
   0.635
N302_10562
DNA excision repair protein ERCC-6-like 2.
    
   0.635
N302_03745
Chordin.
    
 0.564
N302_03746
Chordin.
    
 0.564
N302_10288
Noggin.
    
 0.537
N302_04764
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.532
N302_04765
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.532
N302_10941
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.532
N302_03207
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.532
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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