STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_04472Nuclear respiratory factor 1. (502 aa)    
Predicted Functional Partners:
N302_15028
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha.
   
 0.894
N302_05252
Pre-mRNA-splicing factor RBM22.
   
 0.828
N302_09034
Uncharacterized protein.
     
 0.669
N302_15363
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
     
 0.581
N302_07350
NAD-dependent protein deacetylase sirtuin-1.
    
 
 0.554
N302_09252
NAD-dependent protein deacetylase sirtuin-7.
    
 
 0.473
N302_15362
Gonadotropin inhibitory hormone peptides.
     
 0.457
N302_07887
GA-binding protein alpha chain.
     
 0.454
N302_06732
Nuclear factor erythroid 2-related factor 2; Belongs to the bZIP family.
    
 
 0.447
N302_08510
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
     
 0.427
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.