STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_05243Calcium/calmodulin-dependent protein kinase type II subunit beta. (618 aa)    
Predicted Functional Partners:
N302_04974
Calmodulin-like 4.
    
 0.980
N302_08248
Regulating synaptic membrane exocytosis protein 2.
    
 0.976
N302_00065
Calmodulin; Belongs to the calmodulin family.
   
 0.972
N302_04489
Calmodulin, striated muscle; Belongs to the calmodulin family.
   
 0.972
N302_12789
Glutamate receptor ionotropic, NMDA 2B.
   
 0.961
N302_00197
Phosphoinositide phospholipase C.
    
 0.937
N302_05267
Glutamate receptor 1.
   
 0.937
N302_07566
Phosphoinositide phospholipase C.
   
 
 0.934
N302_14361
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
   
 
 0.934
N302_14362
Phosphoinositide phospholipase C.
   
 
 0.934
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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