STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_07103Unconventional prefoldin RPB5 interactor. (481 aa)    
Predicted Functional Partners:
N302_05643
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 
 0.895
N302_10186
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.832
N302_07117
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.797
N302_08790
RNA polymerase II-associated protein 3.
    
 
 0.794
N302_10455
WD repeat-containing protein 92.
    
 
 0.785
N302_00292
P53 and DNA damage-regulated protein 1.
    
 
 0.744
N302_01354
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.728
N302_06873
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.676
N302_01216
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.657
N302_09524
DNA-directed RNA polymerases I and III subunit RPAC2.
   
   0.654
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.