STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_02219Zinc finger protein 180. (232 aa)    
Predicted Functional Partners:
N302_02759
Adenylate kinase 9.
    
  0.754
N302_00853
Uncharacterized protein.
    
 0.542
N302_09137
Lysine-specific demethylase 6A.
    
 0.511
N302_14203
BRCA1-associated RING domain protein 1.
    
 0.506
N302_02760
Adenylate kinase 9.
    
  0.496
N302_02758
Adenylate kinase 9.
 
  
  0.496
N302_02190
Ragulator complex protein LAMTOR2.
    
  0.489
N302_16312
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.488
N302_13411
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
    
  0.485
N302_15265
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.485
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.