STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_08404Cell division cycle protein 123. (310 aa)    
Predicted Functional Partners:
N302_01102
Eukaryotic translation initiation factor 2 subunit 3.
    
 
 0.963
N302_10185
Selenocysteine-specific elongation factor.
    
 
 0.859
N302_02227
Eukaryotic translation initiation factor 2 subunit 2.
    
 
 0.836
N302_16187
COP9 signalosome complex subunit 5.
   
    0.677
N302_13671
Small acidic protein.
   
    0.630
N302_16412
Uncharacterized protein.
   
    0.613
N302_01688
Eukaryotic translation initiation factor 2 subunit 1.
   
 
 0.484
N302_08538
E3 ubiquitin-protein ligase RNF8.
   
 
 0.458
N302_08539
E3 ubiquitin-protein ligase RNF8.
   
 
 0.451
N302_12078
Methyltransferase-like 10.
      
 0.446
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.