STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_01828Isthmin-2. (458 aa)    
Predicted Functional Partners:
N302_10324
Serine palmitoyltransferase 1.
   
 0.952
N302_03838
Sorbitol dehydrogenase.
  
 
 0.815
N302_01744
Serine palmitoyltransferase small subunit A.
    
 0.814
N302_06305
3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.795
N302_00737
Bifunctional glutamate/proline--tRNA ligase.
   
 0.778
N302_09844
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.726
N302_08152
ORM1-like protein; Negative regulator of sphingolipid synthesis.
    
 
 0.726
N302_08331
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.717
N302_12454
Serine palmitoyltransferase small subunit B.
    
 0.690
N302_16195
Fe-ADH domain-containing protein.
    
 0.675
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.