STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_07069Sal-like 1. (1308 aa)    
Predicted Functional Partners:
N302_10754
Homeobox protein NANOG.
   
 0.791
N302_00478
POU domain protein.
   
 0.729
N302_01141
Histone-binding protein RBBP7.
    
  0.674
N302_13972
Histone-binding protein RBBP4.
    
  0.674
N302_07918
WD repeat-containing protein 73.
    
 0.645
N302_02414
Methyl-CpG-binding domain protein 3.
    
  0.634
N302_02712
POU domain protein.
    
 0.634
N302_08102
Chromodomain-helicase-DNA-binding protein 4.
    
 0.597
N302_13809
Autoimmune regulator.
    
 0.593
N302_00418
Sal-like 4.
    
0.578
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.