STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_01908Matrilin-3. (395 aa)    
Predicted Functional Partners:
N302_06416
Lumican.
   
 0.751
N302_05466
Cartilage oligomeric matrix protein.
    
 0.658
N302_14997
Thrombospondin-4.
    
 0.658
N302_12968
WD repeat-containing protein 90.
    
 0.631
N302_06824
Lysosomal-associated transmembrane protein 5.
     
 0.595
N302_00210
Recombining binding protein suppressor of hairless-like.
   
 0.591
N302_14478
AT-rich interactive domain-containing protein 4B.
    
 0.590
N302_15018
Suppressor of hairless protein.
    
 0.588
N302_04498
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.585
N302_06474
AT-rich interactive domain-containing protein 4A.
    
 0.584
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.