STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_15372Mitochondrial assembly of ribosomal large subunit protein 1. (131 aa)    
Predicted Functional Partners:
N302_08135
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.992
N302_13758
Uncharacterized protein.
  
   0.987
N302_01937
Uncharacterized protein.
  
   0.984
N302_15970
Uncharacterized protein.
  
 
 0.976
N302_09066
Mitochondrial ribosome-associated GTPase 1.
  
 
 0.973
N302_14274
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.972
N302_07721
RNA methyltransferase-like 1.
   
 
 0.969
N302_09147
60S ribosomal protein L8.
    
 
 0.968
N302_02180
KOW domain-containing protein.
   
 
 0.965
N302_13592
Uncharacterized protein.
   
   0.958
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.