STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_16447Collagen alpha-1(XXVI) chain. (414 aa)    
Predicted Functional Partners:
N302_04929
Furin.
    
  0.631
N302_16446
3 beta-hydroxysteroid dehydrogenase type 7.
    
 
 0.579
N302_09665
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.484
N302_09664
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
    
 0.484
N302_15318
Collagen alpha-2(IV) chain.
  
 
 0.480
N302_14393
Ubiquitin-40S ribosomal protein S27a.
    
  0.475
N302_06813
Transcription initiation factor TFIID subunit 12.
    
 0.468
N302_16449
Rab GTPase-binding effector protein 1.
      
 0.468
N302_14932
Histone-lysine N-methyltransferase SETDB1.
    
  0.447
N302_05086
Histone-lysine N-methyltransferase SETDB2.
    
  0.447
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.