STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_04059Amyloid beta A4 protein-binding family B member 2. (685 aa)    
Predicted Functional Partners:
N302_07892
Amyloid beta A4 protein.
    
 0.945
N302_11323
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.717
N302_02009
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
  
  0.668
N302_13468
Mitogen-activated protein kinase.
    
 0.652
N302_06103
Mitogen-activated protein kinase.
    
 0.652
N302_12968
WD repeat-containing protein 90.
    
 0.643
N302_09905
DNA repair protein RAD50.
   
 0.600
N302_00459
ACB domain-containing protein.
   
  0.589
N302_00499
Kinetochore protein Nuf2.
   
 0.589
N302_12804
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.568
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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