STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_09145Peripheral plasma membrane protein CASK. (369 aa)    
Predicted Functional Partners:
N302_04888
Amyloid beta A4 protein-binding family A member 2.
   
 0.998
N302_07120
Protein lin-7 B.
    
 0.998
N302_02431
Amyloid beta A4 protein-binding family A member 1.
   
 0.998
N302_07613
Protein lin-7 C.
    
 0.998
N302_13858
Amyloid beta A4 protein-binding family A member 1.
   
 0.998
N302_13182
Ubiquitin-related modifier 1; Belongs to the URM1 family.
    
 0.998
N302_15676
Protein lin-7 A.
    
 0.998
N302_14677
Amyloid beta A4 protein-binding family A member 1.
   
 0.998
N302_11688
Glutamate receptor ionotropic, NMDA 2A.
   
 0.994
N302_12789
Glutamate receptor ionotropic, NMDA 2B.
   
 0.994
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.