STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_07418Ribosome biogenesis protein BMS1. (1315 aa)    
Predicted Functional Partners:
N302_09849
WD repeat-containing protein 75.
   
 0.999
N302_04886
U3 small nucleolar ribonucleoprotein MPP10.
   
 
 0.999
N302_14756
Bystin.
   
 
 0.999
N302_12145
U3 small nucleolar RNA-associated protein 18.
   
 0.999
N302_15108
Nucleolar protein 14.
   
 
 0.999
N302_00785
WD repeat-containing protein 43.
   
 0.999
N302_08079
WD repeat-containing protein 3.
   
 
 0.999
N302_08644
N-acetyltransferase 10.
   
 
 0.999
N302_04785
RNA 3'-terminal phosphate cyclase-like.
   
 0.999
N302_08869
Periodic tryptophan protein 2.
   
 
 0.999
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.