STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_06715Titin. (53 aa)    
Predicted Functional Partners:
N302_01044
H-2 class II histocompatibility antigen, E-K alpha chain.
   
  0.622
N302_10304
Rhomboid-related protein 3; Belongs to the peptidase S54 family.
    
 0.611
N302_12611
Class II histocompatibility antigen, M alpha chain.
   
  0.587
N302_04644
Pescadillo.
   
 0.571
N302_10356
Testis-expressed sequence 10 protein.
    
 0.569
N302_07282
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.558
N302_15103
Hepatocyte growth factor activator.
    
 0.545
N302_14614
Hyaluronan-binding protein 2.
    
 0.545
N302_09147
60S ribosomal protein L8.
    
  0.509
N302_10104
Guanine nucleotide-binding protein-like 3.
   
  0.502
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.