STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_00946La-related protein 1B. (844 aa)    
Predicted Functional Partners:
N302_03905
ATP-dependent RNA helicase DQX1.
   
 
 0.681
N302_09391
H/ACA ribonucleoprotein complex subunit 4.
   
 
 0.667
N302_05273
La-related protein 1.
  
 
  
0.639
N302_00215
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.523
N302_13958
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.523
N302_08267
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.523
N302_07552
Eukaryotic translation initiation factor 4 gamma 2.
   
 
 0.513
N302_05520
Eukaryotic translation initiation factor 4 gamma 3.
   
 
 0.513
N302_03749
Eukaryotic translation initiation factor 4 gamma 1.
   
 
 0.513
N302_14897
Putative tRNA pseudouridine synthase 1.
   
 
 0.501
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.