STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_02828Triadin. (299 aa)    
Predicted Functional Partners:
N302_08015
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.923
N302_13390
Aspartyl/asparaginyl beta-hydroxylase.
   
 0.879
N302_14214
Myosin light chain 1, skeletal muscle isoform.
   
 
 0.815
N302_14464
Ryanodine receptor 2.
   
 0.783
N302_15621
Ryanodine receptor 2.
   
 0.783
N302_15622
Ryanodine receptor 2.
   
 0.783
N302_00485
Ryanodine receptor 1.
   
 0.760
N302_01929
Peptidylprolyl isomerase.
   
 0.744
N302_07283
Kinesin light chain 1.
    
 0.739
N302_12968
WD repeat-containing protein 90.
    
 0.631
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.