STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_06886ER membrane protein complex subunit 8. (133 aa)    
Predicted Functional Partners:
N302_07516
ER membrane protein complex subunit 2.
   
 0.981
N302_07738
ER membrane protein complex subunit 6.
   
 0.977
N302_05858
Membrane magnesium transporter 1.
    
 0.975
N302_12214
ER membrane protein complex subunit 1.
    
 0.975
N302_10145
ER membrane protein complex subunit 3.
    
 
 0.969
N302_01701
ER membrane protein complex subunit 7.
    
 
 0.964
N302_06885
DNA replication complex GINS protein PSF2.
      
 0.503
N302_12393
Putative ATP-dependent RNA helicase DDX46.
    
 
 0.436
N302_06887
Uncharacterized protein.
      
 0.426
N302_08675
Epimerase domain-containing protein.
   
   0.414
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.