STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_07114Tudor domain-containing protein 12. (650 aa)    
Predicted Functional Partners:
N302_04644
Pescadillo.
   
 0.819
N302_06658
Nucleolar protein 58.
  
 
 0.790
N302_07113
Tudor domain-containing protein 12.
 
      0.785
N302_09816
Splicing factor 3B subunit 1.
   
 0.772
N302_10104
Guanine nucleotide-binding protein-like 3.
  
 0.765
N302_11499
Putative rRNA-processing protein EBP2.
   
 0.761
N302_10884
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.743
N302_06661
Ribosome biogenesis protein WDR12.
   
 0.728
N302_08567
Superkiller viralicidic activity 2-like 2.
   
 0.723
N302_00330
Pre-mRNA-processing factor 6.
    
 0.708
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.