STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_0965360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (177 aa)    
Predicted Functional Partners:
N302_08135
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 0.999
N302_04983
60S ribosomal protein L4.
   
 0.999
N302_08220
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
N302_12017
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.999
N302_09307
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
N302_02455
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
N302_10424
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
N302_13372
40S ribosomal protein S20.
   
 
 0.999
N302_09489
40S ribosomal protein S4.
   
 
 0.999
N302_03698
60S ribosomal protein L22-like 1.
   
 0.999
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.