STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_14869Vacuolar protein sorting-associated protein 72. (228 aa)    
Predicted Functional Partners:
N302_10186
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.983
N302_11477
DNA methyltransferase 1-associated protein 1.
    
 0.983
N302_07117
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.982
N302_01430
E1A-binding protein p400.
    
 0.981
N302_08829
YEATS domain-containing protein 4.
    
 0.980
N302_00355
MRG/MORF4L-binding protein.
   
 0.975
N302_02318
Primary ciliary dyskinesia protein 1.
    
 
 0.970
N302_04959
Mortality factor 4-like 1.
    
 0.958
N302_02917
Coiled-coil domain-containing protein 170.
    
 0.937
N302_12848
Actin-related protein 6; Belongs to the actin family.
    
 
 0.934
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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