STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N302_01681Vesicle transport through interaction with t-SNAREs 1B. (195 aa)    
Predicted Functional Partners:
N302_03005
Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.
    
 0.996
N302_15778
Syntaxin-8.
   
 0.996
N302_11247
Syntaxin-6; Belongs to the syntaxin family.
    
 0.991
N302_02870
Syntaxin-7; Belongs to the syntaxin family.
   
 0.987
N302_00517
Vesicle-associated membrane protein 4.
   
 0.985
N302_14612
Vesicle transport through interaction with t-SNAREs 1A.
    
0.973
N302_00388
Syntaxin-16; Belongs to the syntaxin family.
   
 0.970
N302_05294
Clathrin interactor 1.
    
 
 0.968
N302_02063
Vesicle-associated membrane protein 8.
   
 0.956
N302_11020
Syntaxin-12; Belongs to the syntaxin family.
   
 0.945
Your Current Organism:
Corvus brachyrhynchos
NCBI taxonomy Id: 85066
Other names: American crow, C. brachyrhynchos
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.