STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBX2PBX homeobox 2. (284 aa)    
Predicted Functional Partners:
PKNOX1
PBX/knotted 1 homeobox 1.
    
0.853
MEIS1
Meis homeobox 1.
   
0.845
MEIS2
Meis homeobox 2.
   
0.845
HOXC9
Homeobox C9.
    
 
 0.840
ENSSPUP00000005452
annotation not available
   
 0.836
HOXB6
Homeobox B6.
    
 0.811
HOXB8
Homeobox B8.
    
 0.799
ENSSPUP00000013961
annotation not available
    
 0.799
PKNOX2
PBX/knotted 1 homeobox 2.
    
0.761
HOXB7
Homeobox B7.
    
 0.757
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.