STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1033 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.991
ENSSPUP00000020576
annotation not available
    
 0.988
BPTF
Bromodomain PHD finger transcription factor.
   
 0.984
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.983
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.979
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.949
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.939
ENSSPUP00000000192
annotation not available
   
 0.939
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.939
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
    
 0.922
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.