STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC5Tetratricopeptide repeat domain 5. (440 aa)    
Predicted Functional Partners:
RPL3
Ribosomal protein L3.
   
 0.948
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 0.941
RPL11
Ribosomal protein L11.
   
 
 0.936
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
 0.936
RPL13A
Ribosomal protein L13a.
  
 
 0.933
RPL23A
Ribosomal protein L23a.
   
 
 0.930
RPLP0
Ribosomal protein lateral stalk subunit P0.
   
 
 0.926
RPL5
Ribosomal protein L5.
   
 
 0.925
AK9
Adenylate kinase 9.
  
 
 0.923
RPL23
Ribosomal protein L23.
   
 
 0.923
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.