Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM120BFamily with sequence similarity 120B. (599 aa)    
Predicted Functional Partners:
PSMB1
Proteasome 20S subunit beta 1.
    
 0.786
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.740
ARID4B
AT-rich interaction domain 4B.
    
 0.716
ENSSPUP00000009320
annotation not available
    
 0.707
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
     
 0.704
PALB2
Partner and localizer of BRCA2.
    
 0.703
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
    
 0.691
ENSSPUP00000000386
annotation not available
    
 0.687
ENSSPUP00000001812
annotation not available
      
 0.681
ENSSPUP00000001826
annotation not available
      
 0.681
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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