STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000001856annotation not available (54 aa)    
Predicted Functional Partners:
ENSSPUP00000003016
annotation not available
     
 0.664
ENSSPUP00000004480
annotation not available
    
 
 0.638
ENSSPUP00000017553
annotation not available
    
 
 0.638
RAB9B
RAB9B, member RAS oncogene family.
    
 
 0.638
ARMC5
Armadillo repeat containing 5.
    
 
 0.620
RAB7B
RAB7B, member RAS oncogene family.
    
 
 0.503
ANKRD27
Ankyrin repeat domain 27.
     
 0.503
GAPVD1
GTPase activating protein and VPS9 domains 1.
     
 0.471
KATNAL2
Katanin catalytic subunit A1 like 2.
     
 0.456
RUNDC1
RUN domain containing 1.
    
 
 0.440
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.