STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000002433annotation not available (346 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
    
 0.961
ENSSPUP00000012182
annotation not available
    
 0.961
PAPOLA
poly(A) polymerase alpha.
   
 0.936
PAPOLG
poly(A) polymerase gamma.
   
 0.934
ENSSPUP00000002419
annotation not available
 
     0.918
EXOSC7
Exosome component 7.
    
 0.894
EXOSC4
Exosome component 4.
    
 0.892
ENSSPUP00000014851
annotation not available
    
 0.885
SKIV2L
Ski2 like RNA helicase.
    
 0.880
EXOSC10
Exosome component 10.
    
 0.874
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.