STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC7Histone deacetylase 7. (955 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.958
ARID4A
AT-rich interaction domain 4A.
    
 0.958
MACROH2A2
macroH2A.2 histone.
    
 0.830
MACROH2A1
macroH2A.1 histone.
    
 0.830
SIN3B
SIN3 transcription regulator family member B.
    
 0.823
SIN3A
SIN3 transcription regulator family member A.
    
 0.823
KDM2A
Lysine demethylase 2A.
    
 0.820
ENSSPUP00000015478
annotation not available
    
 0.820
ENSSPUP00000015486
annotation not available
    
 0.820
ENSSPUP00000023233
annotation not available
    
 0.820
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.