STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIL6Peptidylprolyl isomerase like 6. (295 aa)    
Predicted Functional Partners:
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.889
NUP107
Nucleoporin 107.
   
 0.859
NUP155
Nucleoporin 155.
   
 0.847
NUP88
Nucleoporin 88.
    
 0.845
NUP214
Nucleoporin 214.
    
 0.845
NUP85
Nucleoporin 85.
   
 0.834
ENSSPUP00000001516
annotation not available
 
  
 0.831
NUP93
Nucleoporin 93.
   
 0.831
XAB2
XPA binding protein 2.
    
 0.828
SNW1
SNW domain containing 1.
    
 0.826
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.