STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000006825annotation not available (123 aa)    
Predicted Functional Partners:
IFT52
Intraflagellar transport 52.
   
 0.984
IFT88
Intraflagellar transport 88.
  
 0.983
UBXN10
UBX domain protein 10.
    
 0.982
IFT46
Intraflagellar transport 46.
   
 0.982
IFT57
Intraflagellar transport 57.
    
 0.979
CLUAP1
Clusterin associated protein 1.
  
 
 0.975
CHDH
Choline dehydrogenase.
    
 0.961
VCP
Valosin containing protein.
    
 
 0.930
IFT22
Intraflagellar transport 22.
   
 0.929
IFT27
Intraflagellar transport 27.
    
 0.925
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.