STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH1Cadherin 1. (873 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.991
JUP
Junction plakoglobin.
   
 0.979
ENSSPUP00000012797
annotation not available
    
 0.937
ENSSPUP00000008126
annotation not available
  
  
 
0.891
ARVCF
ARVCF delta catenin family member.
    
 0.868
ENSSPUP00000022004
annotation not available
    
 0.868
ENSSPUP00000022010
annotation not available
    
 0.868
CDH5
Cadherin 5.
     
0.862
CDH11
Cadherin 11.
  
 
0.829
CDH7
Cadherin 7.
    
0.820
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.