STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS3Thrombospondin 3. (477 aa)    
Predicted Functional Partners:
ENSSPUP00000018466
annotation not available
  
 
0.867
THBS1
Thrombospondin 1.
  
0.841
ITGB5
Integrin subunit beta 5.
    
 0.838
ITGB4
Integrin subunit beta 4.
   
 0.818
ITGA5
Integrin subunit alpha 5.
    
 0.817
ENSSPUP00000013492
annotation not available
    
 0.817
THBS2
Thrombospondin 2.
  
0.814
ITGA4
Integrin subunit alpha 4.
    
 0.812
ITGAV
Integrin subunit alpha V.
    
 0.810
ITGB6
Integrin subunit beta 6.
    
 0.810
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.