STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000009196annotation not available (447 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.940
ENSSPUP00000010054
annotation not available
 
     0.923
ENSSPUP00000009144
annotation not available
 
     0.921
ENSSPUP00000005243
annotation not available
 
  
 
 0.900
COPS5
COP9 signalosome subunit 5.
    
  0.715
RAC1
Rac family small GTPase 1.
   
 0.705
RAC3
Rac family small GTPase 3.
   
 0.705
RAC2
Rac family small GTPase 2.
   
 0.705
RHOJ
Ras homolog family member J.
   
 0.688
RHOQ
Ras homolog family member Q.
   
 0.688
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.