STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000016141annotation not available (282 aa)    
Predicted Functional Partners:
ENSSPUP00000020608
annotation not available
    
 0.823
ENSSPUP00000020620
annotation not available
    
 0.823
TCF3
Transcription factor 3.
    
 0.823
TCF12
Transcription factor 12.
    
 0.823
ENSSPUP00000021871
annotation not available
    
 0.823
LMO2
LIM domain only 2.
   
 0.780
LDB2
LIM domain binding 2.
    
 0.773
LDB1
LIM domain binding 1.
    
 0.773
CBFB
Core-binding factor subunit beta.
     
 0.769
GATA2
GATA binding protein 2.
   
 0.740
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.