STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUBCNLRubicon like autophagy enhancer. (775 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance associated.
    
 0.930
C1orf109
Chromosome 1 open reading frame 109.
   
    0.840
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.840
RUBCN
Rubicon autophagy regulator.
    
 
0.770
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.754
ACOT12
acyl-CoA thioesterase 12.
   
    0.752
ACOT11
acyl-CoA thioesterase 11.
   
    0.752
LIX1L
Limb and CNS expressed 1 like.
   
    0.751
LIX1
Limb and CNS expressed 1.
   
    0.751
CALHM5
Calcium homeostasis modulator family member 5.
   
    0.688
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.