STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RETREG1Reticulophagy regulator 1. (328 aa)    
Predicted Functional Partners:
ENSSPUP00000016132
annotation not available
   
 0.990
ENSSPUP00000019154
annotation not available
   
 0.989
GNL2
G protein nucleolar 2.
   
 0.977
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.977
NMD3
NMD3 ribosome export adaptor.
   
 
 0.973
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 0.972
RPL23A
Ribosomal protein L23a.
   
 0.971
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.958
GTPBP4
GTP binding protein 4.
   
 
 0.957
ZNF593
Zinc finger protein 593.
   
 
 0.952
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.