STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTSSASerine palmitoyltransferase small subunit A. (68 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 0.993
SPTSSB
Serine palmitoyltransferase small subunit B.
  
  
0.954
ORMDL3
ORMDL sphingolipid biosynthesis regulator 3.
    
 0.942
ORMDL1
ORMDL sphingolipid biosynthesis regulator 1.
    
 0.942
ORMDL2
ORMDL sphingolipid biosynthesis regulator 2.
    
 0.942
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
    
 0.938
ENSSPUP00000016374
annotation not available
    
 0.938
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
    
 0.938
GCAT
Glycine C-acetyltransferase.
    
 0.839
B4GALT5
Beta-1,4-galactosyltransferase 5.
      
 0.555
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.