Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSPUP00000009320 | ERCC4 | ENSSPUP00000009320 | ENSSPUP00000009914 | annotation not available | ERCC excision repair 4, endonuclease catalytic subunit. | 0.962 |
ENSSPUP00000009320 | EXO1 | ENSSPUP00000009320 | ENSSPUP00000018378 | annotation not available | Exonuclease 1. | 0.956 |
ENSSPUP00000009320 | MLH1 | ENSSPUP00000009320 | ENSSPUP00000020752 | annotation not available | mutL homolog 1. | 0.984 |
ENSSPUP00000009320 | MLH3 | ENSSPUP00000009320 | ENSSPUP00000019121 | annotation not available | mutL homolog 3. | 0.970 |
ENSSPUP00000009320 | MSH2 | ENSSPUP00000009320 | ENSSPUP00000017720 | annotation not available | mutS homolog 2. | 0.995 |
ENSSPUP00000009320 | MSH3 | ENSSPUP00000009320 | ENSSPUP00000001571 | annotation not available | mutS homolog 3. | 0.972 |
ENSSPUP00000009320 | MSH6 | ENSSPUP00000009320 | ENSSPUP00000024470 | annotation not available | mutS homolog 6. | 0.995 |
ENSSPUP00000009320 | PCNA | ENSSPUP00000009320 | ENSSPUP00000010915 | annotation not available | Proliferating cell nuclear antigen. | 0.999 |
ENSSPUP00000009320 | PMS1 | ENSSPUP00000009320 | ENSSPUP00000019120 | annotation not available | PMS1 homolog 1, mismatch repair system component. | 0.968 |
ENSSPUP00000009320 | PMS2 | ENSSPUP00000009320 | ENSSPUP00000005082 | annotation not available | PMS1 homolog 2, mismatch repair system component. | 0.985 |
ERCC4 | ENSSPUP00000009320 | ENSSPUP00000009914 | ENSSPUP00000009320 | ERCC excision repair 4, endonuclease catalytic subunit. | annotation not available | 0.962 |
ERCC4 | EXO1 | ENSSPUP00000009914 | ENSSPUP00000018378 | ERCC excision repair 4, endonuclease catalytic subunit. | Exonuclease 1. | 0.868 |
ERCC4 | MLH1 | ENSSPUP00000009914 | ENSSPUP00000020752 | ERCC excision repair 4, endonuclease catalytic subunit. | mutL homolog 1. | 0.971 |
ERCC4 | MLH3 | ENSSPUP00000009914 | ENSSPUP00000019121 | ERCC excision repair 4, endonuclease catalytic subunit. | mutL homolog 3. | 0.942 |
ERCC4 | MSH2 | ENSSPUP00000009914 | ENSSPUP00000017720 | ERCC excision repair 4, endonuclease catalytic subunit. | mutS homolog 2. | 0.992 |
ERCC4 | MSH3 | ENSSPUP00000009914 | ENSSPUP00000001571 | ERCC excision repair 4, endonuclease catalytic subunit. | mutS homolog 3. | 0.975 |
ERCC4 | MSH6 | ENSSPUP00000009914 | ENSSPUP00000024470 | ERCC excision repair 4, endonuclease catalytic subunit. | mutS homolog 6. | 0.970 |
ERCC4 | PCNA | ENSSPUP00000009914 | ENSSPUP00000010915 | ERCC excision repair 4, endonuclease catalytic subunit. | Proliferating cell nuclear antigen. | 0.884 |
ERCC4 | PMS1 | ENSSPUP00000009914 | ENSSPUP00000019120 | ERCC excision repair 4, endonuclease catalytic subunit. | PMS1 homolog 1, mismatch repair system component. | 0.944 |
ERCC4 | PMS2 | ENSSPUP00000009914 | ENSSPUP00000005082 | ERCC excision repair 4, endonuclease catalytic subunit. | PMS1 homolog 2, mismatch repair system component. | 0.954 |
page 1 of 6