STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPCN1Two pore segment channel 1. (750 aa)    
Predicted Functional Partners:
ENSSPUP00000001146
annotation not available
   
 0.997
ENSSPUP00000016029
annotation not available
    
 0.890
ENSSPUP00000018017
annotation not available
    
0.890
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
 0.857
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.836
ENSSPUP00000006276
annotation not available
   
 0.809
IFT122
Intraflagellar transport 122.
   
 0.809
WDR19
WD repeat domain 19.
    
 0.805
IFT140
Intraflagellar transport 140.
    
 0.803
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.707
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.