STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPUP00000020683annotation not available (199 aa)    
Predicted Functional Partners:
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
  
 0.625
MRPL40
Mitochondrial ribosomal protein L40.
   
  
 0.474
PHPT1
Phosphohistidine phosphatase 1.
   
  
 0.440
ENSSPUP00000017714
annotation not available
   
  
 0.440
C22orf39
Chromosome 22 open reading frame 39.
      
 0.437
ENSSPUP00000013766
annotation not available
      
 0.435
NIPAL3
NIPA like domain containing 3.
      
 0.434
GNB1L
G protein subunit beta 1 like.
   
  
 0.419
Your Current Organism:
Sphenodon punctatus
NCBI taxonomy Id: 8508
Other names: Hatteria punctata, S. punctatus, hatteria, tuatara
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.